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Creators/Authors contains: "Lecomte, Nicolas"

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  1. Abstract The Arctic is warming four times faster than the global average1and plant communities are responding through shifts in species abundance, composition and distribution2–4. However, the direction and magnitude of local changes in plant diversity in the Arctic have not been quantified. Using a compilation of 42,234 records of 490 vascular plant species from 2,174 plots across the Arctic, here we quantified temporal changes in species richness and composition through repeat surveys between 1981 and 2022. We also identified the geographical, climatic and biotic drivers behind these changes. We found greater species richness at lower latitudes and warmer sites, but no indication that, on average, species richness had changed directionally over time. However, species turnover was widespread, with 59% of plots gaining and/or losing species. Proportions of species gains and losses were greater where temperatures had increased the most. Shrub expansion, particularly of erect shrubs, was associated with greater species losses and decreasing species richness. Despite changes in plant composition, Arctic plant communities did not become more similar to each other, suggesting no biotic homogenization so far. Overall, Arctic plant communities changed in richness and composition in different directions, with temperature and plant–plant interactions emerging as the main drivers of change. Our findings demonstrate how climate and biotic drivers can act in concert to alter plant composition, which could precede future biodiversity changes that are likely to affect ecosystem function, wildlife habitats and the livelihoods of Arctic peoples5,6
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    Free, publicly-accessible full text available April 30, 2026
  2. Abstract Identifying the migration routes and stopover sites used by declining species is critical for developing targeted conservation actions. Long-distance migratory shorebirds are among the groups of birds declining most rapidly, yet we frequently lack detailed knowledge about the routes and stopover sites they use during their hemisphere-spanning migrations. This is especially true for species that migrate through mid-continental regions in the Western Hemisphere. We therefore used satellite transmitters to track 212 individuals of 6 shorebird species during their southward migrations—Pluvialis dominica (American Golden-Plover), Limosa haemastica (Hudsonian Godwit), Tringa flavipes (Lesser Yellowlegs), and Calidris subruficollis (Buff-breasted Sandpiper), C. melanotos (Pectoral Sandpiper), and Bartramia longicauda (Upland Sandpiper)—as they crossed the Amazon Basin of South America, a region from which reports of shorebird numbers are increasing but remain relatively rare. Our results make clear that the Amazon Basin provides stopover habitat for a large number of shorebirds: more than 74% of individuals tracked crossing the Amazon Basin stopped over in the region for an average of 2–14 days, with some spending the entire nonbreeding season there. All species selected stopover sites along the region’s many rivers and lakes, while within stopover sites each species exhibited distinct habitat preferences. The timing of stopovers within sub-basins of the Amazon Basin also coincided with periods of low water, when the muddy, shallow water habitats preferred by most shorebirds are likely plentiful. Together, our results highlight the need for detailed investigations into shorebird abundance and distribution within the Amazon Basin, threats to shorebirds within particular subbasins, and links between shorebird conservation efforts and those targeting the myriad other species that inhabit this dynamic, hyper-diverse region. 
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  3. Abstract Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m3of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition. 
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    Free, publicly-accessible full text available December 1, 2025
  4. Abstract Fungi are among the most diverse and ecologically important kingdoms in life. However, the distributional ranges of fungi remain largely unknown as do the ecological mechanisms that shape their distributions1,2. To provide an integrated view of the spatial and seasonal dynamics of fungi, we implemented a globally distributed standardized aerial sampling of fungal spores3. The vast majority of operational taxonomic units were detected within only one climatic zone, and the spatiotemporal patterns of species richness and community composition were mostly explained by annual mean air temperature. Tropical regions hosted the highest fungal diversity except for lichenized, ericoid mycorrhizal and ectomycorrhizal fungi, which reached their peak diversity in temperate regions. The sensitivity in climatic responses was associated with phylogenetic relatedness, suggesting that large-scale distributions of some fungal groups are partially constrained by their ancestral niche. There was a strong phylogenetic signal in seasonal sensitivity, suggesting that some groups of fungi have retained their ancestral trait of sporulating for only a short period. Overall, our results show that the hyperdiverse kingdom of fungi follows globally highly predictable spatial and temporal dynamics, with seasonality in both species richness and community composition increasing with latitude. Our study reports patterns resembling those described for other major groups of organisms, thus making a major contribution to the long-standing debate on whether organisms with a microbial lifestyle follow the global biodiversity paradigms known for macroorganisms4,5
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